Data quality metrics extracted from 4l8d.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4L8D at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
AUSTRALIAN SYNCHROTRON BEAMLINE MX2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Australian Synchrotron
Beamline
_diffrn_source.pdbx_synchrotron_beamline
MX2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2012-02-25
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.956
Software
Data collection
_software.classification
Blu-Ice (ice)
Data scaling #1
_software.classification
SCALA (3.3.12; 2009/01/20; Phil R. Evans; pre@mrc-lmb.cam.ac.uk)
Data scaling #2
_software.classification
XSCALE
Phasing
_software.classification
PHASER (Randy J. Read; cimr-phaser@lists.cam.ac.uk)
Refinement #1
_software.classification
BUSTER-TNT (Gerard Bricogne; buster-develop@GlobalPhasing.com)
Refinement #2
_software.classification
BUSTER (2.10.0)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
85.343 136.132 80.874 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.95600 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
136.132
High resolution limit [Å]
_reflns.d_resolution_high
1.900
Rmerge
_reflns.pdbx_Rsym_value
0.126
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
74976
  <I/σ(I)> -
Completeness [%]
_reflns.percent_possible_obs
100.0
Multiplicity
_reflns.pdbx_redundancy
7.4
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
4L8D
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2013-06-16
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
80.9 - 1.900 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1879 / 0.2261
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB ENTRY 4HUU