Data quality metrics extracted from 4l87.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4L87 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRL BEAMLINE BL7-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL7-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2012-01-01
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97946
Software
Data collection
_software.classification
ADSC (Quantum)
Data reduction #1
_software.classification
DENZO (Zbyszek Otwinowski; hkl@hkl-xray.com)
Data reduction #2
_software.classification
HKL-2000
Data scaling
_software.classification
SCALEPACK (Zbyszek Otwinowski; hkl@hkl-xray.com)
Phasing
_software.classification
PHASER
Refinement
_software.classification
REFMAC (5.6.0117; Garib N. Murshudov; garib@ysbl.york.ac.uk)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 3 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
167.074 167.074 65.156 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97946 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
144.690
High resolution limit [Å]
_reflns.d_resolution_high
2.897
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.094
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
23501
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
6.20
Completeness [%]
_reflns.percent_possible_obs
95.0
Multiplicity
_reflns.pdbx_redundancy
9.9
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
4L87
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2013-06-16
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
144.7 - 2.897 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2549 / 0.2676
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB ENTRY 3VBB