Data quality metrics extracted from 5l6o.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5L6O at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I02
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I02
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2016-01-23
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97949
Software
Data reduction
_software.classification
XDS
Data scaling #1
_software.classification
Aimless (0.5.17)
Data scaling #2
_software.classification
XDS
Phasing
_software.classification
MOLREP
Refinement
_software.classification
BUSTER (2.11.6)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
46.817 57.214 113.184 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97949 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
57.210 57.210 1.980
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.880 5.930 1.880
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.049 0.035 0.548
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs
25671 - -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
17.60 - 2.50
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
100.0 99.7 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.2 5.7 4.8
CC(1/2)
_reflns.pdbx_CC_half
0.999 - -

Refinement
PDB entry ID
_entry.id
5L6O
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-05-30
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
56.6 - 1.880 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1890 / 0.2060
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
3ZFY