Data quality metrics extracted from 5l2k.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5L2K at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
AUSTRALIAN SYNCHROTRON BEAMLINE MX2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Australian Synchrotron
Beamline
_diffrn_source.pdbx_synchrotron_beamline
MX2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2015-12-03
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9537
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
SCALA (3.3.21)
Phasing
_software.classification
PHASER
Refinement
_software.classification
BUSTER (2.10.0)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 64 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
174.998 174.998 170.869 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.95370 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
47.730 3.370
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
3.200 3.200
Rmerge
_reflns_shell.Rmerge_I_obs
- 7.760
Rmeas
_reflns_shell.pdbx_Rrim_I_all
- 0.083
Rpim
_reflns_shell.pdbx_Rpim_I_all
- 0.011
Total number of observations
_reflns_shell.number_measured_all
- 227748
Total number unique
_reflns_shell.number_unique_all
- 3727
<I/σ(I)>
_reflns_shell.pdbx_netI_over_sigmaI_obs
- 1.80
Completeness [%]
_reflns_shell.percent_possible_all
- 100.0
Multiplicity
_reflns_shell.pdbx_redundancy
- 61.1
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.638

Refinement
PDB entry ID
_entry.id
5L2K
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-08-02
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
47.7 - 3.200 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2180 / 0.2392
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
5L2J, 4G8F