Data quality metrics extracted from 5kqs.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5KQS at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 23-ID-D
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
23-ID-D
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2016-06-10
Detector
_diffrn_detector.type
DECTRIS PILATUS3 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.03320
Software
Data reduction
_software.classification
MOSFLM
Data scaling
_software.classification
Aimless (0.5.12)
Phasing
_software.classification
Auto-Rickshaw
Refinement
_software.classification
PHENIX (1.10_2155)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
129.34 77.48 37.03 90.0 104.4 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.03320 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
65.900 65.900 1.530
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.500 8.220 1.500
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.069 0.047 0.813
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.082 0.054 0.965
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.043 0.026 0.512
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
184856 1400 9177
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
56456 371 2762
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.pdbx_netI_over_sigmaI_obs
7.60 16.40 1.30
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.8 99.9 99.9
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.3 3.8 3.3
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.996 0.996 0.609

Refinement
PDB entry ID
_entry.id
5KQS
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-07-06
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
38.7 - 1.500 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1585 / 0.1788
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
2PX2