Data quality metrics extracted from 5kq5.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5KQ5 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 23-ID-D
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
23-ID-D
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2012-03-26
Detector
_diffrn_detector.type
MARMOSAIC 300 mm CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.0
Software
Data collection
_software.classification
HKL-2000
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
PHASER
Refinement
_software.classification
BUSTER-TNT (2.11.6)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 61 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
124.50 124.50 402.25 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
30.000 30.000 3.460
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
3.400 9.150 3.400
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.138 0.034 0.681
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns.pdbx_number_measured_all
105416 - -
Total number unique
_reflns.number_obs
25248 - -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
7.30 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
96.2 92.5 94.2
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
4.2 3.9 3.1
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
5KQ5
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-07-05
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
29.9 - 3.410 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2207 / 0.2590
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
4QFG