Data quality metrics extracted from 5kp1.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5KP1 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRL BEAMLINE BL7-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL7-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2014-04-17
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.12709
Software
Data scaling
_software.classification
SCALA
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.10.1_2155)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
50.42 55.59 55.57 79.73 89.77 89.79
Wavelength
_diffrn_radiation_wavelength.wavelength
1.12709 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
24.071
High resolution limit [Å]
_reflns.d_resolution_high
1.218
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.052
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
158414
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
17.50
Completeness [%]
_reflns.percent_possible_obs
89.2
Multiplicity
_reflns.pdbx_redundancy
5.2
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
5KP1
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-07-01
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
24.1 - 1.218 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1663 / 0.1854