Data quality metrics extracted from 5kn5.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5KN5 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 31-ID
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
31-ID
Temperature [K]
_diffrn.ambient_temp
193
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2011-03-18
Detector
_diffrn_detector.type
RAYONIX MX-225
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97931
Software
Data reduction
_software.classification
MOSFLM
Data scaling
_software.classification
SCALA (3.3.16)
Phasing
_software.classification
MOLREP
Refinement
_software.classification
REFMAC
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
63.249 164.346 64.972 90.00 104.21 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97931 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
24.995 24.995 2.950
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.800 8.850 2.800
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.106 0.028 0.612
Rmeas
_reflns.pdbx_Rrim_I_all
0.149 - -
Rpim
_reflns.pdbx_Rpim_I_all
0.077 - -
Total number of observations
_reflns.pdbx_number_measured_all
117046 - -
Total number unique
_reflns.number_obs
31162 - -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
9.60 21.00 1.30
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.5 91.8 99.9
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.8 3.6 3.8
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
5KN5
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-06-27
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
25.0 - 2.800 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2064 / 0.2630
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given