Data quality metrics extracted from 3km6.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3KM6 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
RIGAKU MICROMAX-007 HF
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
2008-08-01
Detector
_diffrn_detector.type
RIGAKU RAXIS IV++
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.54
Software
Data collection
_software.classification
CrystalClear
Data reduction
_software.classification
MOSFLM
Data scaling
_software.classification
SCALA (3.2.25; 21/9/2006; Phil R. Evans; pre@mrc-lmb.cam.ac.uk)
Phasing
_software.classification
REFMAC
Refinement
_software.classification
REFMAC (Garib N. Murshudov; garib@ysbl.york.ac.uk)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
75.876 89.242 69.206 90.00 89.89 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54000 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
44.630 2.210
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.100 2.100
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.119 0.375
  Rmeas - -
  Rpim - -
Total number of observations
_reflns_shell.number_measured_all
- 22237
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
26463 3412
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
18.40 1.80
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.2 87.5
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
7.3 6.5
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
3KM6
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2009-11-10
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
44.6 - 2.100 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1530 / 0.2060
Structure solution method
_refine.pdbx_method_to_determine_struct
Difference Fourier
Starting model
_refine.pdbx_starting_model
pdb ID 3HJO