Data quality metrics extracted from 1km9.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 1KM9 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
RIGAKU RU300
Temperature [K]
_diffrn.ambient_temp
115
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
1998-02-25
Detector
_diffrn_detector.type
RIGAKU RAXIS IIC
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.5418
Software
Data scaling
_software.classification
SCALEPACK
Phasing
_software.classification
CNS
Refinement
_software.classification
CNS (1.0; 1998; Axel T. Brunger; axel.brunger@yale.edu)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
42.806 45.918 57.459 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54180 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
24.360 1.980
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.960 1.950
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.055 0.196
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
8085 402
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
9.40 7.06
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
94.2 91.8
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
5.6 4.2
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
1KM9
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2001-12-14
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
24.4 - 1.960 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1780 / 0.2160
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB ENTRY 1RCA