Data quality metrics extracted from 3kh1.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3KH1 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRL BEAMLINE BL9-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL9-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2009-08-04
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE (Wolfgang Kabsch)
Phasing #1
_software.classification
SHELX (George M. Sheldrick; gsheldr@shelx.uni-ac.gwdg.de)
Phasing #2
_software.classification
autoSHARP
Model building
_software.classification
MolProbity (3beta29; D.C. & J.S. Richardson lab; molprobity@kinemage.biochem.duke.edu)
Refinement #1
_software.classification
REFMAC (5.5.0102; Garib N. Murshudov; garib@ysbl.york.ac.uk)
Refinement #2
_software.classification
PHENIX (P.D. Adams; PDAdams@lbl.gov)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
77.852 83.906 71.278 90.00 116.89 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97898 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
41.959 1.420
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.370 1.370
Rmerge
_reflns_shell.Rmerge_I_obs
- 0.495
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
85080 -
<I/σ(I)>
_reflns_shell.meanI_over_sigI_obs
- 2.20
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.2 97.3
  Multiplicity - -
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
3KH1
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2009-10-29
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
42.0 - 1.370 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1320 / 0.1640
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD