Data quality metrics extracted from 8kfo.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 8KFO at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRF BEAMLINE BL02U1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL02U1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2022-08-19
Detector
_diffrn_detector.type
DECTRIS EIGER2 S 9M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97918
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
Aimless
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.16_3549: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
I 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
146.821 45.714 209.668 90.00 104.02 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97918 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
132.770
High resolution limit [Å]
_reflns.d_resolution_high
3.600
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.107
Rmeas
_reflns.pdbx_Rrim_I_all
0.117
Rpim
_reflns.pdbx_Rpim_I_all
0.045
  Total number of observations -
Total number unique
_reflns.number_obs
16194
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
9.40
Completeness [%]
_reflns.percent_possible_obs
98.7
Multiplicity
_reflns.pdbx_redundancy
6.6
CC(1/2)
_reflns.pdbx_CC_half
0.998

Refinement
PDB entry ID
_entry.id
8KFO
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2023-08-16
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
56.2 - 3.600 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2761 / 0.3158
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given