Data quality metrics extracted from 5kbn.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5KBN at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALS BEAMLINE 8.2.2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
8.2.2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2015-08-26
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.99986
Software
Data reduction
_software.classification
MOSFLM
Data scaling
_software.classification
Aimless (0.5.17)
Phasing
_software.classification
PHASER
Refinement
_software.classification
REFMAC (5.8.0151)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 41
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
87.655 87.655 143.625 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.99986 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
39.200 39.200 2.580
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.480 8.940 2.480
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.085 0.027 1.419
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs
38347 - -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
20.40 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.9 96.9 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
15.0 14.9 15.2
CC(1/2)
_reflns.pdbx_CC_half
1.000 - -

Refinement
PDB entry ID
_entry.id
5KBN
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-06-03
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
37.9 - 2.480 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2186 / 0.2389
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
5A43