Data quality metrics extracted from 7k9s.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7K9S at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
NSLS-II BEAMLINE 17-ID-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
NSLS-II
Beamline
_diffrn_source.pdbx_synchrotron_beamline
17-ID-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2019-09-24
Detector
_diffrn_detector.type
DECTRIS EIGER2 X 9M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9202
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
Aimless
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.18.2_3874)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
51.639 78.450 188.105 90.000 95.743 90.000
Wavelength
_diffrn_radiation_wavelength.wavelength
0.92020 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
18.210
High resolution limit [Å]
_reflns.d_resolution_high
3.210
  Rmerge -
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
24421
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
6.04
Completeness [%]
_reflns.percent_possible_obs
98.7
Multiplicity
_reflns.pdbx_redundancy
5.2
CC(1/2)
_reflns.pdbx_CC_half
0.996

Refinement
PDB entry ID
_entry.id
7K9S
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2020-09-29
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
18.2 - 3.210 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2124 / 0.2512
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
6CJI