Data quality metrics extracted from 1k39.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 1K39 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
MAX II BEAMLINE I711
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
MAX II
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I711
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
2000-11-18
Detector
_diffrn_detector.type
MARRESEARCH
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.946
Software
Data reduction #1
_software.classification
DENZO
Data reduction #2
_software.classification
TRUNCATE
Data scaling
_software.classification
CCP4 (TRUNCATE)
Phasing
_software.classification
AMoRE
Refinement
_software.classification
REFMAC (5.1.24)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 41 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
116.65 116.65 216.78 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.94600 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
20.000
High resolution limit [Å]
_reflns.d_resolution_high
3.300
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.131
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
22527
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
7.50
  Completeness [%] -
Multiplicity
_reflns.pdbx_redundancy
5.3
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
1K39
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2001-10-02
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
20.0 - 3.290 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2051 / 0.2621
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB ENTRY 1HNU