Data quality metrics extracted from 6k12.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6K12 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRF BEAMLINE BL19U1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL19U1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2017-05-30
Detector
_diffrn_detector.type
DECTRIS PILATUS3 S 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97736
Software
Data reduction
_software.classification
HKL-3000
Data scaling
_software.classification
HKL-3000
Phasing
_software.classification
HKL-3000
Refinement
_software.classification
PHENIX (1.12_2829)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
255.604 147.677 65.266 90.00 90.01 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97736 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
48.886 2.850
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.794 2.800
  Rmerge - -
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.100 0.100
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
59522 59822
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
2.00 -
Completeness [%]
_reflns.percent_possible_obs
99.4 -
Multiplicity
_reflns.pdbx_redundancy
3.5 -
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
6K12
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2019-05-09
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
45.7 - 2.794 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2796 / 0.3079
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
5ZXC