Data quality metrics extracted from 7jtr.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7JTR at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 24-ID-E
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
24-ID-E
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2017-03-30
Detector
_diffrn_detector.type
DECTRIS EIGER X 16M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9792
Software
Data reduction
_software.classification
XDS (20161205)
Data scaling
_software.classification
XSCALE (20161205)
Phasing
_software.classification
PHASER (v2.7.16)
Refinement
_software.classification
PHENIX (v1.11.1)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
95.20 91.70 174.63 90.00 91.44 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97920 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
19.995
High resolution limit [Å]
_reflns.d_resolution_high
2.500
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.084
Rmeas
_reflns.pdbx_Rrim_I_all
0.091
Rpim
_reflns.pdbx_Rpim_I_all
0.032
  Total number of observations -
Total number unique
_reflns.number_obs
102294
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
14.85
Completeness [%]
_reflns.percent_possible_obs
98.0
Multiplicity
_reflns.pdbx_redundancy
7.7
CC(1/2)
_reflns.pdbx_CC_half
0.999

Refinement
PDB entry ID
_entry.id
7JTR
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2020-08-18
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
20.0 - 2.500 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2005 / 0.2372
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
1ANF,2GKI