Data quality metrics extracted from 5jri.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5JRI at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALBA BEAMLINE XALOC
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALBA
Beamline
_diffrn_source.pdbx_synchrotron_beamline
XALOC
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2014-11-30
Detector
_diffrn_detector.type
DECTRIS PILATUS3 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97922
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE
Phasing
_software.classification
SHELXDE
Refinement
_software.classification
PHENIX (dev_2341: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
71.734 79.327 127.049 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97922 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
49.080 2.022
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.952 1.952
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.238 1.545
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
101579 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
5.94 1.00
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
100.0 99.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.7 5.6
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
5JRI
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-05-06
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
49.1 - 1.952 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1991 / 0.2421
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD