Data quality metrics extracted from 4jon.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4JON at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRL BEAMLINE BL11-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL11-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2013-01-23
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE (July 4, 2012; Wolfgang Kabsch)
Phasing
_software.classification
PHASER (2.3.0; Randy J. Read; cimr-phaser@lists.cam.ac.uk)
Model building
_software.classification
MolProbity (3beta29; D.C. & J.S. Richardson lab; molprobity@kinemage.biochem.duke.edu)
Refinement #1
_software.classification
BUSTER-TNT (2.10.0; Gerard Bricogne; buster-develop@GlobalPhasing.com)
Refinement #2
_software.classification
BUSTER (2.10.0)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 2 2 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
95.040 183.332 97.268 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97862 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
48.634 48.634 2.150
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.150 9.390 2.100
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.101 0.011 0.011
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns_shell.number_measured_obs
- 3492 16077
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
46447 616 3584
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
14.07 56.70 1.30
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.6 97.5 97.7
  Multiplicity - - -
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4JON
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2013-03-18
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
48.6 - 2.150 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1826 / 0.2029
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given