Data quality metrics extracted from 6jji.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6JJI at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRF BEAMLINE BL19U1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL19U1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2018-05-05
Detector
_diffrn_detector.type
DECTRIS PILATUS3 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97900
Software
Data reduction
_software.classification
HKL-3000
Data scaling
_software.classification
HKL-3000
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.13_2998)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 2 2 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
23.509 29.244 57.557 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97900 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
16.042
High resolution limit [Å]
_reflns.d_resolution_high
3.100
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.108
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
825
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
8.60
Completeness [%]
_reflns.percent_possible_obs
96.6
Multiplicity
_reflns.pdbx_redundancy
9.6
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
6JJI
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2019-02-25
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
16.0 - 3.100 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1927 / 0.2497
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
6JJH