Data quality metrics extracted from 6jal.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6JAL at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
RIGAKU MICROMAX-007 HF
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
2018-02-24
Detector
_diffrn_detector.type
RIGAKU RAXIS IV++
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.5418
Software
Data collection
_software.classification
HKL-3000 (3000)
Data reduction
_software.classification
iMOSFLM (7.2.2)
Data scaling
_software.classification
Aimless (0.7.3)
Phasing
_software.classification
PHASER (2.8.2)
Model building
_software.classification
Coot (0.8.9.1)
Refinement
_software.classification
REFMAC (5.8.0238)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
53.04 85.13 55.34 90.00 92.99 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54180 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
55.260
High resolution limit [Å]
_reflns.d_resolution_high
1.560
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.031
Rmeas
_reflns.pdbx_Rrim_I_all
0.040
Rpim
_reflns.pdbx_Rpim_I_all
0.024
  Total number of observations -
Total number unique
_reflns.number_obs
69683
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
30.10
Completeness [%]
_reflns.percent_possible_obs
99.8
Multiplicity
_reflns.pdbx_redundancy
4.6
CC(1/2)
_reflns.pdbx_CC_half
0.999

Refinement
PDB entry ID
_entry.id
6JAL
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2019-01-24
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
55.3 - 1.560 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1271 / 0.1505
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
6J9W