Data quality metrics extracted from 5jaa.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5JAA at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SOLEIL BEAMLINE PROXIMA 1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SOLEIL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
PROXIMA 1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2012-05-03
Detector
_diffrn_detector.type
PSI PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.979030
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE
Phasing
_software.classification
SHELX
Refinement
_software.classification
PHENIX (1.9_1692)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
129.0 119.8 33.4 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97903 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
43.854 43.854 3.170
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.990 8.820 2.990
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.061 0.024 0.537
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs
18810 - -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
10.88 30.44 1.64
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
93.6 87.0 92.5
Multiplicity
_reflns.pdbx_redundancy
2.2 - -
CC(1/2)
_reflns.pdbx_CC_half
0.998 - -

Refinement
PDB entry ID
_entry.id
5JAA
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-04-12
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
40.5 - 2.993 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1999 / 0.2482
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD