Data quality metrics extracted from 5j98.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5J98 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SOLEIL BEAMLINE PROXIMA 1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SOLEIL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
PROXIMA 1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2015-12-12
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.990
Software
Data reduction
_software.classification
XDS (ai)
Data scaling
_software.classification
Aimless
Phasing
_software.classification
PHASER
Refinement #1
_software.classification
CNS (1.3)
Refinement #2
_software.classification
PHENIX
General information
Spacegroup name
_symmetry.space_group_name_H-M
I 2 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
340.042 396.848 431.697 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.99000 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
49.500 2.640
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.600 2.600
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.200 0.980
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
780730 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
6.00 0.90
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
88.3 69.3
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.8 0.9
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
5J98
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-04-08
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
49.5 - 2.600 Å
R
_refine.ls_R_factor_obs
0.2790
WARNING: neither Rwork nor Rfree given
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
5J96