Experiment | |
---|---|
Method _exptl.method | X-RAY DIFFRACTION The method used in the experiment. |
Experimental protocol _diffrn_radiation.pdbx_diffrn_protocol | SINGLE WAVELENGTH SINGLE WAVELENGTH, LAUE, or MAD. |
Source type _diffrn_source.source | ROTATING ANODE The general class of the radiation source. |
Source details _diffrn_source.type | RIGAKU MICROMAX-007 HF The make, model or name of the source of radiation. |
Temperature [K] _diffrn.ambient_temp | 100 The mean temperature in kelvins at which the intensities were |
Detector technology _diffrn_detector.detector | PIXEL The general class of the radiation detector. |
Collection date _diffrn_detector.pdbx_collection_date | 2023-01-16 The date of data collection. |
Detector _diffrn_detector.type | RIGAKU HyPix-6000HE The make, model or name of the detector device used. |
Wavelength(s) [Å] _diffrn_source.pdbx_wavelength_list | 1.54 Comma separated list of wavelengths or wavelength range. |
Software | |
Data collection _software.classification | CrysalisPro The classification of the program according to its |
Data scaling _software.classification | Aimless The classification of the program according to its |
Phasing _software.classification | MOLREP The classification of the program according to its |
Model building _software.classification | Coot The classification of the program according to its |
Refinement _software.classification | REFMAC (5.8.0405) The classification of the program according to its |
General information | |
Spacegroup name _symmetry.space_group_name_H-M | P 41 21 2 Hermann-Mauguin space-group symbol. Note that the |
Unit cell parameters _cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma} | 95.951 Unit-cell length a corresponding to the structure reported in 95.951 Unit-cell length b corresponding to the structure reported in 61.509 Unit-cell length c corresponding to the structure reported in 90.0 Unit-cell angle alpha of the reported structure in degrees. 90.0 Unit-cell angle beta of the reported structure in degrees. 90.0 Unit-cell angle gamma of the reported structure in degrees. |
Wavelength _diffrn_radiation_wavelength.wavelength | 1.54000 ÅThe radiation wavelength in angstroms. |
Data quality metrics | Overall | InnerShell | OuterShell |
---|---|---|---|
Low resolution limit [Å] _reflns.d_resolution_low _reflns_shell.d_res_low | 27.226 The largest value in angstroms for the interplanar spacings | 27.210 The highest value in angstroms for the interplanar spacings | 2.490 The highest value in angstroms for the interplanar spacings |
High resolution limit [Å] _reflns.d_resolution_high _reflns_shell.d_res_high | 2.400 The smallest value in angstroms for the interplanar spacings | 8.980 The smallest value in angstroms for the interplanar spacings | 2.400 The smallest value in angstroms for the interplanar spacings |
Rmerge _reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs | 0.153 The R value for merging intensities satisfying the observed | 0.030 The value of Rmerge(I) for reflections classified as 'observed' | 1.228 The value of Rmerge(I) for reflections classified as 'observed' |
Rmeas _reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all | 0.161 The redundancy-independent merging R factor value Rrim, | 0.032 The redundancy-independent merging R factor value Rrim, | 1.292 The redundancy-independent merging R factor value Rrim, |
Rpim _reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all | 0.049 The precision-indicating merging R factor value Rpim, | 0.011 The precision-indicating merging R factor value Rpim, | 0.400 The precision-indicating merging R factor value Rpim, |
Total number of observations | - | - | - |
Total number unique _reflns.number_obs _reflns_shell.number_unique_obs | 11708 The number of reflections in the REFLN list (not the DIFFRN_REFLN | 266 The total number of measured reflections classified as 'observed' | 1182 The total number of measured reflections classified as 'observed' |
<I/σ(I)> _reflns.pdbx_netI_over_sigmaI | 14.60 The mean of the ratio of the intensities to their | - | - |
Completeness [%] _reflns.percent_possible_obs | 98.9 The percentage of geometrically possible reflections represented | - | - |
Multiplicity _reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy | 19.5 Overall redundancy for this data set. | 11.4 Redundancy for the current shell. | 19.4 Redundancy for the current shell. |
CC(1/2) _reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half | 0.999 The Pearson's correlation coefficient expressed as a decimal value | 1.000 The Pearson's correlation coefficient expressed as a decimal value | 0.955 The Pearson's correlation coefficient expressed as a decimal value |
Refinement | |
---|---|
PDB entry ID _entry.id | 8J6Y |
Deposition date _pdbx_database_status.recvd_initial_deposition_date | 2023-04-26 |