Data quality metrics extracted from 4j6m.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4J6M at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I03
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I03
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2009-01-21
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9745
Software
Data collection
_software.classification
GDA
Data reduction
_software.classification
DENZO
Data scaling
_software.classification
SCALEPACK (Zbyszek Otwinowski; hkl@hkl-xray.com)
Phasing
_software.classification
PHASER (Randy J. Read; cimr-phaser@lists.cam.ac.uk)
Refinement #1
_software.classification
BUSTER-TNT (BUSTER 2.10.0; Gerard Bricogne; buster-develop@GlobalPhasing.com)
Refinement #2
_software.classification
BUSTER (2.10.0)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
52.289 65.098 106.780 95.26 88.88 89.62
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97450 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 2.570
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.480 2.480
Rmerge
_reflns_shell.Rmerge_I_obs
- 0.294
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
46992 -
<I/σ(I)>
_reflns_shell.meanI_over_sigI_obs
- 2.04
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
94.8 74.9
Multiplicity
_reflns_shell.pdbx_redundancy
- 1.9
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
4J6M
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2013-02-11
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
36.3 - 2.480 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2082 / 0.2427
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB ENTRY 4G96