Data quality metrics extracted from 9j4j.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 9J4J at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
RIGAKU FR-E SUPERBRIGHT
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2014-12-31
Detector
_diffrn_detector.type
RIGAKU SATURN 944+
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.54178
Software
Data reduction
_software.classification
HKL-3000
Data scaling
_software.classification
HKL-3000
Phasing
_software.classification
RESOLVE
Refinement
_software.classification
REFMAC (5.8.0267)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 65
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
167.642 167.642 85.297 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54178 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 2.850
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.800 2.800
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.155 0.495
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
33668 1682
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
11.22 -
Completeness [%]
_reflns.percent_possible_obs
100.0 -
Multiplicity
_reflns.pdbx_redundancy
5.4 -
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
9J4J
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2024-08-09
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
48.4 - 2.803 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1582 / 0.2079
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given