Data quality metrics extracted from 5j48.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5J48 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALS BEAMLINE 5.0.1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
5.0.1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2015-04-15
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97741
Software
Data reduction
_software.classification
iMOSFLM
Data scaling
_software.classification
Aimless
Phasing
_software.classification
PHENIX
Refinement
_software.classification
PHENIX (1.10_2155: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
35.51 59.24 67.32 90.00 100.17 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97741 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
59.240
High resolution limit [Å]
_reflns.d_resolution_high
1.490
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.047
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
44551
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
14.10
Completeness [%]
_reflns.percent_possible_obs
99.1
Multiplicity
_reflns.pdbx_redundancy
4.2
CC(1/2)
_reflns.pdbx_CC_half
0.852

Refinement
PDB entry ID
_entry.id
5J48
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-03-31
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
35.0 - 1.490 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1634 / 0.1891
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
4ku7