Data quality metrics extracted from 8j3i.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 8J3I at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRF BEAMLINE BL18U1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL18U1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2020-01-08
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.987
Software
Data reduction
_software.classification
HKL-3000
Data scaling
_software.classification
HKL-3000
Phasing
_software.classification
PHENIX
Refinement
_software.classification
PHENIX (1.20.1_4487: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 31 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
99.467 99.467 99.030 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.98700 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
19.860
High resolution limit [Å]
_reflns.d_resolution_high
2.390
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.088
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
22428
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
3.50
Completeness [%]
_reflns.percent_possible_obs
98.7
Multiplicity
_reflns.pdbx_redundancy
5.5
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
8J3I
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2023-04-16
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
19.9 - 2.390 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2253 / 0.2808
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given