Data quality metrics extracted from 4j28.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4J28 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I03
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I03
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2011-12-12
Detector
_diffrn_detector.type
PSI PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9763
Software
Data scaling #1
_software.classification
SCALA (3.3.16; 2010/01/06; Phil R. Evans; pre@mrc-lmb.cam.ac.uk)
Data scaling #2
_software.classification
XSCALE
Phasing
_software.classification
REFMAC
Refinement
_software.classification
REFMAC (Garib N. Murshudov; garib@ysbl.york.ac.uk)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
68.728 95.611 96.988 90.00 91.21 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97630 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
29.013 29.013 1.820
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.730 5.470 1.730
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.045 0.017 0.449
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns_shell.number_measured_all
- 13414 56453
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
128218 4138 17914
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
12.80 34.90 1.70
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.3 97.4 94.5
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.2 3.2 3.2
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4J28
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2013-02-04
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
29.0 - 1.730 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1706 / 0.1935
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
4J27