Data quality metrics extracted from 5io9.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5IO9 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SLS BEAMLINE X10SA
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X10SA
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2009-12-14
Detector
_diffrn_detector.type
DECTRIS PILATUS3 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.00
Software
Data reduction
_software.classification
XDS (January 30 2009)
Data scaling
_software.classification
SADABS (2008/1)
Phasing
_software.classification
MOLREP (10.2.31)
Refinement
_software.classification
BUSTER (2.9.3)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
27.026 37.783 47.752 88.65 105.78 96.55
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
26.000 1.330
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.300 1.300
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.pdbx_Rsym_value
0.042 0.350
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
39956 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
13.30 1.80
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
85.7 46.3
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
2.2 2.1
CC(1/2)
_reflns.pdbx_CC_half
1.000 -

Refinement
PDB entry ID
_entry.id
5IO9
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-03-08
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
26.0 - 1.300 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1864 / 0.2099
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
5IOI