Data quality metrics extracted from 4ioy.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4IOY at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
NSLS BEAMLINE X29A
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
NSLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X29A
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2012-10-10
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9792
Software
Data collection
_software.classification
CrystalClear
Data reduction
_software.classification
DENZO (Zbyszek Otwinowski; hkl@hkl-xray.com)
Data scaling
_software.classification
SCALEPACK (Zbyszek Otwinowski; hkl@hkl-xray.com)
Phasing #1
_software.classification
SOLVE (2.13; 2-Jul-2007; Tom Terwilliger; terwilliger@LANL.gov)
Phasing #2
_software.classification
RESOLVE (2.13; 23-Jun-2007; Thomas C. Terwilliger; terwilliger@lanl.gov)
Refinement
_software.classification
PHENIX (1.8.1_1168; Paul D. Adams; PDAdams@lbl.gov)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 65
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
133.978 133.978 40.342 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.541800.97920 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
30.000 30.000 2.020
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.945 4.200 1.945
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.078 0.047 0.517
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
29648 3207 2575
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
17.40 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
96.5 100.0 84.5
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
8.6 11.6 2.0
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4IOY
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2013-01-08
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
29.7 - 1.945 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1766 / 0.1966
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD