Data quality metrics extracted from 4iod.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4IOD at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 24-ID-E
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
24-ID-E
Temperature [K]
_diffrn.ambient_temp
77
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2012-06-06
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Software
Data collection
_software.classification
CONSOLE
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XDS
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (phenix.refine: 1.7.3_928)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 2 2 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
89.18 141.01 91.40 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97918 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
45.000
High resolution limit [Å]
_reflns.d_resolution_high
1.800
Rmerge
_reflns.pdbx_Rsym_value
0.071
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
53488
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
21.60
Completeness [%]
_reflns.percent_possible_obs
99.7
Multiplicity
_reflns.pdbx_redundancy
9.9
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
4IOD
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2013-01-07
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
44.6 - 1.800 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1700 / 0.2120
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB ENTRY 1KHY AND 1QVR