Data quality metrics extracted from 2if7.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 2IF7 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
MAD
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
NSLS BEAMLINE X29A
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
NSLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X29A
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2005-10-20
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9789,0.9791,0.9714
Software
Data collection
_software.classification
CBASS
Data reduction #1
_software.classification
DENZO (Zbyszek Otwinowski; zbyszek@mix.swmed.edu)
Data reduction #2
_software.classification
HKL-2000
Data scaling
_software.classification
SCALEPACK (Zbyszek Otwinowski; zbyszek@mix.swmed.edu)
Phasing #1
_software.classification
SHELXD
Phasing #2
_software.classification
SOLVE
Phasing #3
_software.classification
RESOLVE
Model building #1
_software.classification
SHELXE
Model building #2
_software.classification
Coot
Model building #3
_software.classification
O
Refinement
_software.classification
REFMAC (5.2.0005; Murshudov, G.N.; ccp4@dl.ac.uk)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
121.196 148.452 86.572 90.00 112.86 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.978900.979100.97140 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
40.000 3.110
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
3.000 3.000
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.059 0.348
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
28402 2838
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
15.10 3.08
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.7 99.9
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.2 3.2
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
2IF7
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2006-09-20
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
40.0 - 3.000 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2130 / 0.2660
Structure solution method
_refine.pdbx_method_to_determine_struct
MAD