Data quality metrics extracted from 3i9y.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3I9Y at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
MAD
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
NSLS BEAMLINE X4C
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
NSLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X4C
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
2005-01-01
Detector
_diffrn_detector.type
MAR scanner 345 mm plate
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.98950,0.97940,0.97912,0.96863
Software
Data reduction
_software.classification
DENZO (Zbyszek Otwinowski; hkl@hkl-xray.com)
Data scaling
_software.classification
SCALEPACK (Zbyszek Otwinowski; hkl@hkl-xray.com)
Phasing
_software.classification
SOLVE (2.11; 12-May-2006; Tom Terwilliger; terwilliger@LANL.gov)
Refinement
_software.classification
CNS (1.2; Axel T. Brunger; axel.brunger@yale.edu)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 65
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
149.880 149.880 42.712 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.989500.979400.979120.96863 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
20.000 20.000 2.230
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.160 4.610 2.160
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.095 0.045 0.419
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
29951 3119 2944
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
9.20 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.9 99.7 99.9
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
5.5 5.1 5.3
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
3I9Y
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2009-07-13
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
19.8 - 2.160 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2220 / 0.2610
Structure solution method
_refine.pdbx_method_to_determine_struct
MAD