Data quality metrics extracted from 6i5o.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6I5O at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I04
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I04
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2018-04-26
Detector
_diffrn_detector.type
DECTRIS PILATUS3 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97950
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
Aimless (0.6.2)
Phasing
_software.classification
CRANK2
Refinement
_software.classification
REFMAC
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
107.00 52.16 106.74 90.00 95.97 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97950 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
53.140 53.080 1.360
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.330 5.950 1.330
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.088 0.033 1.397
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.098 0.037 1.564
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.044 0.017 0.693
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
134241 1574 9884
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
9.80 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.9 99.2 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
4.9 4.7 5.0
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.998 0.998 0.498

Refinement
PDB entry ID
_entry.id
6I5O
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2018-11-14
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
53.1 - 1.330 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1542 / 0.1777
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD