Data quality metrics extracted from 6i3b.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6I3B at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I03
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I03
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2017-02-22
Detector
_diffrn_detector.type
DECTRIS PILATUS3 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.7500
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
Aimless
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.13_2998: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
47.051 70.442 58.144 90.00 100.51 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.75000 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
46.260 1.020
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.000 1.000
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.063 1.208
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.068 1.314
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.026 0.512
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
200513 9930
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
14.40 1.60
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
100.0 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.8 6.5
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.704

Refinement
PDB entry ID
_entry.id
6I3B
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2018-11-05
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
39.7 - 1.000 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1530 / 0.1748