Data quality metrics extracted from 6i28.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6I28 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
AUSTRALIAN SYNCHROTRON BEAMLINE MX1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Australian Synchrotron
Beamline
_diffrn_source.pdbx_synchrotron_beamline
MX1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2017-03-15
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9537
Software
Data reduction
_software.classification
MOSFLM
Data scaling
_software.classification
Aimless (0.5.31)
Phasing
_software.classification
PHASER (2.7.17)
Refinement
_software.classification
PHENIX (1.14)
General information
Spacegroup name
_symmetry.space_group_name_H-M
I 2 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
64.69 66.72 97.96 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.95370 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
46.440 46.440 1.680
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.650 9.040 1.650
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.171 0.033 3.937
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.178 0.034 4.085
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.047 0.010 1.082
Total number of observations
_reflns.pdbx_number_measured_all
365717 - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
25886 191 1250
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
11.20 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
100.0 98.7 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
14.1 10.5 14.2
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.999 0.999 0.404

Refinement
PDB entry ID
_entry.id
6I28
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2018-10-31
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
33.7 - 1.650 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1852 / 0.2239
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD