Data quality metrics extracted from 5i2x.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5I2X at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 21-ID-D
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
21-ID-D
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
2014-06-16
Detector
_diffrn_detector.type
MAR scanner 300 mm plate
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.03829
Software
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
MOLREP
Refinement
_software.classification
REFMAC (5.8.0071)
General information
Spacegroup name
_symmetry.space_group_name_H-M
I 41 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
119.026 119.026 170.778 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.03829 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 3.110
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
3.000 6.460 3.000
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.148 0.067 0.485
Rmeas
_reflns.pdbx_Rrim_I_all
0.160 - -
Rpim
_reflns.pdbx_Rpim_I_all
0.059 - -
Total number of observations
_reflns.pdbx_number_measured_all
86466 - -
Total number unique
_reflns.number_obs
12617 - -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
7.10 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.7 97.8 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.9 6.2 7.0
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
5I2X
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-02-09
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
50.0 - 3.000 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1920 / 0.2256
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
2I46