Data quality metrics extracted from 5hyv.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5HYV at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
NSRRC BEAMLINE BL13C1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
NSRRC
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL13C1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2012-09-22
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.974
Software
Data scaling
_software.classification
HKL-2000
Refinement
_software.classification
PHENIX (1.10_2152: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 2 2 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
100.762 183.830 98.986 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97400 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
30.000 30.000 1.070
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.030 2.220 1.030
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.075 0.064 0.686
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns.pdbx_number_measured_all
3096480 - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
443954 44024 43901
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
16.00 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.3 96.3 98.9
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
7.0 10.5 5.2
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
5HYV
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-02-02
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
27.6 - 1.031 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1056 / 0.1163
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
1GPU