Data quality metrics extracted from 8ht3.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 8HT3 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
RIGAKU FR-E DW
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2022-12-14
Detector
_diffrn_detector.type
RIGAKU HyPix-6000HE
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.54184
Software
Data reduction
_software.classification
CrysalisPro
Data scaling
_software.classification
XDS
Phasing
_software.classification
MrBUMP
Refinement
_software.classification
PHENIX (1.18.2_3874)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 2 2 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
43.901 72.213 70.139 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54184 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
14.050
High resolution limit [Å]
_reflns.d_resolution_high
2.500
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.028
Rmeas
_reflns.pdbx_Rrim_I_all
0.031
Rpim
_reflns.pdbx_Rpim_I_all
0.013
  Total number of observations -
Total number unique
_reflns.number_obs
4028
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
61.28
Completeness [%]
_reflns.percent_possible_obs
98.9
Multiplicity
_reflns.pdbx_redundancy
5.2
CC(1/2)
_reflns.pdbx_CC_half
1.000

Refinement
PDB entry ID
_entry.id
8HT3
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2022-12-20
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
14.1 - 2.500 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1946 / 0.2533
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given