Data quality metrics extracted from 9hsp.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 9HSP at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE MASSIF-3
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
MASSIF-3
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2023-04-07
Detector
_diffrn_detector.type
DECTRIS EIGER X 4M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9677
Software
Refinement
_software.classification
PHENIX (1.19.2_4158)
General information
Spacegroup name
_symmetry.space_group_name_H-M
I 2 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
50.370 69.328 118.385 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.96770 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
59.825 2.210
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.088 2.088
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.126 1.342
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.137 1.451
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.052 0.546
Total number of observations
_reflns_shell.number_measured_all
- 3831
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
23632 558
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.pdbx_netI_over_sigmaI_obs
7.40 1.30
Completeness [%]
_reflns.percent_possible_obs
88.0 -
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.8 6.9
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
9HSP
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2024-12-19
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
59.8 - 2.090 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2045 / 0.2373
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given