Data quality metrics extracted from 5hsv.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5HSV at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE ID29
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
ID29
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2014-09-12
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M-F
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.0332
Software
Data collection
_software.classification
MxCuBE
Data reduction
_software.classification
XDS
Data scaling
_software.classification
Aimless (0.5.4)
Phasing
_software.classification
PHASER
Refinement
_software.classification
REFMAC (5.8.0107)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
37.904 68.443 71.952 115.12 103.17 93.96
Wavelength
_diffrn_radiation_wavelength.wavelength
1.03320 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
36.248 36.250 1.160
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.140 6.230 1.140
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.114 0.048 3.225
Rmeas
_reflns_shell.pdbx_Rrim_I_all
- 0.052 3.912
Rpim
_reflns_shell.pdbx_Rpim_I_all
- 0.019 2.179
Total number of observations
_reflns_shell.number_measured_all
- 9902 680
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
159748 1387 296
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.pdbx_netI_over_sigmaI_obs
7.20 28.30 0.30
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
69.3 99.4 2.6
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.2 7.1 2.3
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.999 0.998 0.131

Refinement
PDB entry ID
_entry.id
5HSV
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-01-26
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
36.2 - 1.500 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1660 / 0.1898
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
1CWA