Data quality metrics extracted from 5hoc.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5HOC at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I04-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I04-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2014-12-16
Detector
_diffrn_detector.type
DECTRIS PILATUS 2M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.91741
Software
Data reduction
_software.classification
DIALS
Data scaling
_software.classification
Aimless (0.3.11)
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.10.1_2155)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 42 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
60.149 60.149 61.564 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.91741 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
60.150 60.150 1.420
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.360 4.710 1.360
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.069 0.076 0.465
  Rmeas - - -
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.021 0.023 0.194
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
244067 8714 18278
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
24811 711 2961
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
16.30 36.70 2.60
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.8 100.0 99.7
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
9.8 12.3 6.2
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.998 0.994 0.814

Refinement
PDB entry ID
_entry.id
5HOC
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-01-19
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
43.0 - 1.360 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2327 / 0.2468
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
2WQI