Data quality metrics extracted from 5hnt.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5HNT at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SEALED TUBE
Source details
_diffrn_source.type
OXFORD DIFFRACTION ENHANCE ULTRA
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2015-01-26
Detector
_diffrn_detector.type
OXFORD ONYX CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.5418
Software
Data reduction
_software.classification
CrysalisPro
Data scaling
_software.classification
SCALA (3.3.22)
Phasing
_software.classification
MOLREP
Refinement
_software.classification
REFMAC (5.8.0073)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
48.757 82.156 76.074 90.00 102.08 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54180 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
82.156 25.655 2.110
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.000 6.320 2.000
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.192 0.064 0.684
Rmeas
_reflns.pdbx_Rrim_I_all
0.211 - -
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.084 0.027 0.342
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
224647 7267 25164
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
39654 1274 5737
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
7.90 9.00 0.80
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.8 98.0 99.4
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
5.7 5.7 4.4
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
5HNT
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-01-18
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
74.4 - 2.000 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1821 / 0.2275