Data quality metrics extracted from 5hit.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5HIT at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SOLEIL BEAMLINE PROXIMA 2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SOLEIL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
PROXIMA 2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2014-04-08
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9801
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
Aimless (0.1.27)
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 2 2 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
53.624 121.137 73.855 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.98010 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
46.830 46.830 3.000
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.850 9.010 2.850
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.071 0.019 0.613
  Rmeas - - -
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.040 0.012 0.334
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
23869 741 3540
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
5817 209 836
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
15.30 44.60 2.70
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.2 98.2 99.4
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
4.1 3.5 4.2
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.999 0.999 0.795

Refinement
PDB entry ID
_entry.id
5HIT
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-01-12
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
46.8 - 2.850 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2047 / 0.2679
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
1CFD, 3OXQ