Data quality metrics extracted from 9h8s.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 9H8S at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I03
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I03
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2022-02-24
Detector
_diffrn_detector.type
DECTRIS EIGER2 XE 16M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9763
Software
Data reduction #1
_software.classification
autoPROC
Data reduction #2
_software.classification
XDS (VERSION Jan 10
Data scaling #1
_software.classification
autoPROC (Version 1.0.5)
Data scaling #2
_software.classification
Aimless
Phasing
_software.classification
BUSTER
Refinement
_software.classification
BUSTER (2.11.8 (26-JUL-2023))
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
71.066 69.157 166.825 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97630 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
65.381 2.271
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.157 2.157
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.165 2.165
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.171 2.245
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.047 0.593
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
38173 1909
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
12.00 1.40
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
94.6 64.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
13.4 14.2
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.998 0.547

Refinement
PDB entry ID
_entry.id
9H8S
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2024-10-29
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
65.4 - 2.157 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1944 / 0.2477
Structure solution method
_refine.pdbx_method_to_determine_struct
FOURIER SYNTHESIS