Data quality metrics extracted from 5h65.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5H65 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRF BEAMLINE BL18U1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL18U1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2014-12-23
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97876
Software
Data collection
_software.classification
HKL-3000
Data processing
_software.classification
HKL-3000
Data scaling #1
_software.classification
HKL-3000
Data scaling #2
_software.classification
HKL
Phasing
_software.classification
PHENIX (1.9_1692)
Refinement
_software.classification
PHENIX (1.9_1692)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
49.231 87.824 87.120 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97876 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 2.180
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.100 4.520 2.100
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.129 0.058 0.619
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.141 0.063 0.683
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.055 0.025 0.283
Total number of observations
_reflns.pdbx_number_measured_all
139163 - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
22462 2461 2099
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
5.20 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.1 99.7 93.6
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.2 6.0 5.2
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.996 0.842

Refinement
PDB entry ID
_entry.id
5H65
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-11-10
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
43.9 - 2.100 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1960 / 0.2481
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD