Data quality metrics extracted from 9h5r.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 9H5R at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
BESSY BEAMLINE 14.2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
BESSY
Beamline
_diffrn_source.pdbx_synchrotron_beamline
14.2
Temperature [K]
_diffrn.ambient_temp
90
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2014-03-26
Detector
_diffrn_detector.type
RAYONIX MX-225
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.918
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
Aimless (0.5.7)
Phasing
_software.classification
PHENIX
Refinement
_software.classification
REFMAC (5.8.0135)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
87.910 115.100 125.115 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.91800 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
125.110
High resolution limit [Å]
_reflns.d_resolution_high
2.840
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.130
Rmeas
_reflns.pdbx_Rrim_I_all
0.147
Rpim
_reflns.pdbx_Rpim_I_all
0.067
Total number of observations
_reflns.pdbx_number_measured_all
138677
Total number unique
_reflns.number_obs
30574
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
12.00
Completeness [%]
_reflns.percent_possible_obs
99.8
Multiplicity
_reflns.pdbx_redundancy
4.5
CC(1/2)
_reflns.pdbx_CC_half
0.995

Refinement
PDB entry ID
_entry.id
9H5R
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2024-10-23
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
48.0 - 2.840 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2030 / 0.2732
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given