Data quality metrics extracted from 6h5b.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6H5B at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE ID30B
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
ID30B
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2017-09-25
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M-F
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.979336
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
autoPROC
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.13_2998)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 64
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
135.101 135.101 60.382 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97934 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 2.900
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.500 2.800
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.069 -
Rmeas
_reflns.pdbx_Rrim_I_all
0.076 -
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.030 0.440
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
10926 1810
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
14.49 1.90
Completeness [%]
_reflns.percent_possible_obs
69.5 -
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.2 5.9
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.658

Refinement
PDB entry ID
_entry.id
6H5B
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2018-07-24
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
45.0 - 2.800 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1987 / 0.2554
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given