Data quality metrics extracted from 5h5x.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5H5X at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
RIGAKU MICROMAX-007 HF
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
2013-01-16
Detector
_diffrn_detector.type
RIGAKU RAXIS IV++
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.54
Software
Data collection
_software.classification
HKL-2000
Data reduction #1
_software.classification
HKL-2000
Data reduction #2
_software.classification
HKL
Data scaling #1
_software.classification
HKL-2000
Data scaling #2
_software.classification
HKL
Phasing #1
_software.classification
PHASER
Phasing #2
_software.classification
PHASER
Refinement
_software.classification
PHENIX
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 31
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
187.787 187.787 80.858 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 2.380
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.300 4.950 2.300
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.141 0.070 0.632
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs
118981 - -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
11.10 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
84.0 91.3 83.7
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
2.1 2.9 2.2
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
5H5X
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-11-10
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
32.5 - 2.300 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1792 / 0.2426
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given